No datasets match
  1. crisprBase::AsCas12a
    AsCas12a CrisprNuclease object
    rda| rds
    CrisprNuclease
  2. crisprBase::BE4max
    BE4max BaseEditor object
    rda| rds
    BaseEditor
  3. crisprBase::CasRx
    CasRx CrisprNuclease object
    rda| rds
    CrisprNuclease
  4. crisprBase::Csm
    Csm CrisprNuclease object
    rda| rds
    CrisprNuclease
  5. crisprBase::enAsCas12a
    enAsCas12a CrisprNuclease object
    rda| rds
    CrisprNuclease
  6. crisprBase::MAD7
    MAD7 CrisprNuclease object
    rda| rds
    CrisprNuclease
  7. crisprBase::restrictionEnzymes
    List of Nuclease objects representing common restriction enzymes
    rda| rds
    list
  8. crisprBase::SaCas9
    SaCas9 CrisprNuclease object
    rda| rds
    CrisprNuclease
  9. crisprBase::SpCas9
    SpCas9 CrisprNuclease object
    rda| rds
    CrisprNuclease
  10. crisprBase::SpG
    SpG CrisprNuclease object
    rda| rds
    CrisprNuclease
  11. crisprDesign::grListExample
    Example of a TxDb object converted to a GRangesList
    rda| rds
    CompressedGRangesList
  12. crisprDesign::grRepeatsExample
    Example of a GRanges object containing repeat elements
    rda| rds
    GRanges
  13. crisprDesign::guideSetExample
    Example of a GuideSet object storing gRNA sequences targeting the CDS of IQSEC3
    rda| rds
    GuideSet
  14. crisprDesign::guideSetExampleFullAnnotation
    Example of a fully-annotated GuideSet object storing gRNA sequences targeting the CDS of IQSEC3
    rda| rds
    GuideSet
  15. crisprDesign::guideSetExampleWithAlignments
    Example of a GuideSet object storing gRNA sequences targeting the CDS of IQSEC3 with off-target alignments.
    rda| rds
    GuideSet
  16. crisprDesign::snpObjectExample
    Example of a GRanges object containing SNPs
    rda| rds
    GRanges
  17. crisprDesign::tssObjectExample
    Example of a GRanges object containing TSS coordinates
    rda| rds
    GRanges
  18. crisprScore::scoringMethodsInfo
    data.frame detailing available scoring methods
    csv| xlsx| json| ndjson| rda| rds
    data.frame|10 x 7
  19. crisprShiny::guideSetExample_basic
    Example of a GuideSet object storing gRNA sequences targeting the CDS of the human gene KRAS
    rda| rds
    GuideSet
  20. crisprShiny::guideSetExample_kras
    Example of a GuideSet object storing gRNA sequences targeting the CDS of the human gene KRAS
    rda| rds
    GuideSet
  21. crisprShiny::guideSetExample_kras_be
    Example of a GuideSet object storing gRNA sequences targeting the CDS of the human gene KRAS
    rda| rds
    GuideSet
  22. crisprShiny::guideSetExample_ntcs
    Example of a GuideSet object storing gRNA sequences targeting the CDS of the human gene KRAS and NTCs
    rda| rds
    GuideSet
  23. crisprShiny::tooltipAnnotation
    List of tooltip annotations
    csv| json| rda| rds
    list
  24. crisprShiny::tss_kras
    Example of a 'GenomicRanges' object storing annotated TSS ranges for the human gene KRAS
    rda| rds
    GRanges
  25. crisprShiny::txdb_kras
    Example of a 'CompressedGenomicRangesList' object storing annotated ranges for the human gene KRAS
    rda| rds
    CompressedGRangesList
  26. crisprViz::cage
    CAGE peak annotation from AnnotationHub
    rda| rds
    GRanges
  27. crisprViz::cas12aGuideSet
    Example GuideSet targeting the human LTN1 gene.
    rda| rds
    GuideSet
  28. crisprViz::cas9GuideSet
    Example GuideSet targeting the human LTN1 gene.
    rda| rds
    GuideSet
  29. crisprViz::dnase
    DNase I hypersensitive site annotation from AnnotationHub
    rda| rds
    GRanges
  30. crisprViz::gpr21GeneModel
    CompressedGRangesList describing the human GPR21 gene.
    rda| rds
    CompressedGRangesList
  31. crisprViz::gpr21GuideSet
    Example GuideSet targeting the human GPR21 gene.
    rda| rds
    GuideSet
  32. crisprViz::krasGeneModel
    CompressedGRangesList describing the human KRAS gene.
    rda| rds
    CompressedGRangesList
  33. crisprViz::krasGuideSet
    Example GuideSet targeting the human KRAS gene.
    rda| rds
    GuideSet
  34. crisprViz::ltn1GeneModel
    CompressedGRangesList describing the human LTN1 gene.
    rda| rds
    CompressedGRangesList
  35. crisprViz::mmp7GeneModel
    CompressedGRangesList describing the human MMP7 gene.
    rda| rds
    CompressedGRangesList
  36. crisprViz::mmp7GuideSet
    Example GuideSet targeting the human MMP7 gene.
    rda| rds
    GuideSet
  37. crisprViz::repeats
    Subset of repeat elements for hg38.
    rda| rds
    GRanges