crisprBase::restrictionEnzymes
List of Nuclease objects representing common restriction enzymescrisprDesign::grListExample
Example of a TxDb object converted to a GRangesListcrisprDesign::grRepeatsExample
Example of a GRanges object containing repeat elementscrisprDesign::guideSetExample
Example of a GuideSet object storing gRNA sequences targeting the CDS of IQSEC3crisprDesign::guideSetExampleFullAnnotation
Example of a fully-annotated GuideSet object storing gRNA sequences targeting the CDS of IQSEC3crisprDesign::guideSetExampleWithAlignments
Example of a GuideSet object storing gRNA sequences targeting the CDS of IQSEC3 with off-target alignments.crisprDesign::tssObjectExample
Example of a GRanges object containing TSS coordinatescrisprScore::scoringMethodsInfo
data.frame detailing available scoring methodscrisprScore::sgrnaExampleCrispra
Example CRISPRa gRNAs data.frame for the getCrispraiScores functioncrisprScore::sgrnaExampleCrispri
Example CRISPRi gRNAs data.frame for the getCrispraiScores functioncrisprScore::tssExampleCrispra
Example TSS data.frame for the getCrispraiScores functioncrisprScore::tssExampleCrispri
Example TSS data.frame for the getCrispraiScores functioncrisprShiny::guideSetExample_basic
Example of a GuideSet object storing gRNA sequences targeting the CDS of the human gene KRAScrisprShiny::guideSetExample_kras
Example of a GuideSet object storing gRNA sequences targeting the CDS of the human gene KRAScrisprShiny::guideSetExample_kras_be
Example of a GuideSet object storing gRNA sequences targeting the CDS of the human gene KRAScrisprShiny::guideSetExample_ntcs
Example of a GuideSet object storing gRNA sequences targeting the CDS of the human gene KRAS and NTCscrisprShiny::tooltipAnnotation
List of tooltip annotationscrisprViz::cas12aGuideSet
Example GuideSet targeting the human LTN1 gene.crisprViz::gpr21GeneModel
CompressedGRangesList describing the human GPR21 gene.
